Experimentální

MRE
Experimental

Our lab of experimental magnetic resonance is focused on molecular imaging - visualization of transplanted cells by magnetic resonance and optical imaging. 

Experimentální

About Group

The group is primarily focused on in vivo imaging experiments. We use different animal models (mice or rats) to study a variety of pathological conditions: from diabetes to cancer. Our group participate in the development and testing of new contrast agents for 1H, 19F, 31P MR and co-own one patent. We also develop radio frequency coils for magnetic resonance (we own one patent) and develop our own software for spectrum analysis.

Currently, our group is mostly focused on three basic areas:

1. 19F MR imaging

We test 19F MRI multimodal contrast agents developed in collaboration with Charles University, the Academy of Sciences of the Czech Republic, Ghent University and the University of Augsburg. These probes should enable unambiguous detection of transplanted pancreatic islets and quantify their survival. In vitro/in vivo experiments are being carried out in collaboration with the Langerhans Islets Laboratory in IKEM.

2. 31P MR imaging 

We test 31P MRI multimodal and responsive contrast agents developed in cooperation with the Academy of Sciences of the Czech Republic and the Institute of Macromolecular Chemistry. These probes represent a completely new type of contrast agents and are expected to be used as effective drug delivery systems. Some of them change their properties depending on the environment (eg. presence of reactive oxygen species).

3. 1H MR imaging

In cooperation with the Institute of Experimental Medicine, we participate in the studies of brain ischemia and glioblastoma. In cooperation with Palacky University, the University of Augsburg and the Academy of Sciences of the Czech Republic, we test multimodal contrast agents based on gold nanoparticles, iron oxide nanoparticles or gadolinium. In cooperation with the University of Umea, we carry out pancreatic MR imaging. Furthermore, in collaboration with the Langerhans Islets Laboratory in IKEM, we provide MR measurements  of the pancreatic islets in various transplant sites (liver, kidney capsule, omentum).

Valašský seminář v Jizerských horách

Seminar in the Jizera Mountains

“Diagnostic imaging methods and development of contrast agents"

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New article in Nature Communications

The experimental group of magnetic resonance (laboratory of doc. Jirák) from IKEM in cooperation with the Coordinating Chemical Research Group (laboratory of Dr. Polášek) at IOCB Prague published a new article in Nature Communications.

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 Instalace nového optického zobrazovače pro bioluminiscenční a fluorescenční zobrazování

Installation of a new optical imager for bioluminescence and fluorescence imaging

At the beginning of July 2022, a new optical imager for bioluminescence and fluorescence imaging from Spectral Instruments Imaging was installed in IKEM. This instrument currently provides the most sensitive photon detection of commercially available optical imaging systems.

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Current Projects and Grants

Molecular MR and fluorescence imaging of cells labeled with fluorinated polymers

Provider
GA UK
Registration num.
167424
Main resolver
Dominik Havlíček
Period
2024

Water-soluble fluorinated polymers for the next-generation antifouling coatings and multimodal in vivo tracing

Provider
GAČR
Registration num.
22-02836S
Institution
PřF UK
Main resolver
Mgr. Ondřej Sedláček, Ph.D.
Side resolvers
doc. Ing. Daniel Jirák, Ph.D.
Period
2022 - 2024

Latest Publications

Lucie Kracíková, Ladislav Androvič, David Červený, Natalia Jirát-Ziółkowska, Michal Babič, Monika Švábová, Daniel Jirák & Richard Laga

Self-Assembled Fluorinated Nanoparticles as Sensitive and Biocompatible Theranostic Platforms for 19F MRI

Dominik Havlicek, Vyshakh M. Panakkal, Ludek Voska, Ondrej Sedlacek, Daniel Jirak

Phosphorus-Containing Polymers as Sensitive Biocompatible Probes for 31P Magnetic Resonance

Kracíková, L.; Androvič, L.; Potočková, I.; Ziółkowska, N.; Vít, M.; Červený, D.; Jirák, D.; Laga, R.

Frontiers in 19F-MR imaging: nanofluorides and 19F-CEST as novel extensions to the 19F-MRI toolbox

Galisova A, Bar-Shir A

Our Team

Our equipment

Bruker 4,7 T
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Bruker 4.7 T

Experimental MR spectrometer Bruker Biospec 4.7T/20 was installed in 1999 as the first in vivo experimental spectrometer in the Czech Republic. It was shut down in the summer of 2023; it worked until the last moment.

Courses

MR KURZ IKEM

PZM IKEM in cooperation with SRLA ČR organizes Certified Course - Magnetic Resonance Imaging

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