Experimentální

MRE
Experimental

The Laboratory of Experimental Magnetic Resonance specializes in molecular and X-nuclei MR imaging, the development and testing of novel contrast agents, and complementary optical imaging techniques

Experimentální

About Group

The group is primarily focused on in vivo imaging experiments. We use different animal models (mice or rats) to study a variety of pathological conditions: from diabetes to cancer. Our group participate in the development and testing of new contrast agents for 1H, 19F, 31P MR and co-own one patent. We also develop radio frequency coils for magnetic resonance (we own one patent) and develop our own software for spectrum analysis.

Currently, our group is mostly focused on three basic areas:

1. 19F MR imaging

We test 19F MRI multimodal contrast agents developed in collaboration with Charles University, the Academy of Sciences of the Czech Republic, Ghent University and the University of Augsburg. These probes should enable unambiguous detection of transplanted pancreatic islets and quantify their survival. In vitro/in vivo experiments are being carried out in collaboration with the Langerhans Islets Laboratory in IKEM.

2. 31P MR imaging 

We test 31P MRI multimodal and responsive contrast agents developed in cooperation with the Academy of Sciences of the Czech Republic and the Institute of Macromolecular Chemistry. These probes represent a completely new type of contrast agents and are expected to be used as effective drug delivery systems. Some of them change their properties depending on the environment (eg. presence of reactive oxygen species).

3. 1H MR imaging

In cooperation with the Institute of Experimental Medicine, we participate in the studies of brain ischemia and glioblastoma. In cooperation with Palacky University, the University of Augsburg and the Academy of Sciences of the Czech Republic, we test multimodal contrast agents based on gold nanoparticles, iron oxide nanoparticles or gadolinium. In cooperation with the University of Umea, we carry out pancreatic MR imaging. Furthermore, in collaboration with the Langerhans Islets Laboratory in IKEM, we provide MR measurements  of the pancreatic islets in various transplant sites (liver, kidney capsule, omentum).

Valašský seminář v Jizerských horách

Seminar in the Jizera Mountains

“Diagnostic imaging methods and development of contrast agents"

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New article in Nature Communications

The experimental group of magnetic resonance (laboratory of doc. Jirák) from IKEM in cooperation with the Coordinating Chemical Research Group (laboratory of Dr. Polášek) at IOCB Prague published a new article in Nature Communications.

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 Instalace nového optického zobrazovače pro bioluminiscenční a fluorescenční zobrazování

Installation of a new optical imager for bioluminescence and fluorescence imaging

At the beginning of July 2022, a new optical imager for bioluminescence and fluorescence imaging from Spectral Instruments Imaging was installed in IKEM. This instrument currently provides the most sensitive photon detection of commercially available optical imaging systems.

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Current Projects and Grants

Bimodal imaging of cells by fluorescence and magnetic resonance using new types of inorganic-organic nanocomposites, aka application of luminescent nanoprobes with magnetic contrast

Provider
AZV MZ ČR
Registration num.
NW25-08-00113
Main resolver
doc. RNDr. Karolína Šišková Ph.D.
Side resolvers
prof. Ing. Daniel Jirák Ph.D.
Period
2025 - 2028

Novel Metal-Free Contrast Agents for 1H Magnetic Resonance and Optical Imaging

Provider
AZV MZ ČR
Registration num.
NW24-08-00144
Institution
IKEM
Main resolver
doc. Ing. Daniel Jirák, Ph.D.
Period
2024 - 2027

Latest Publications

Functional mitochondrial respiration is essential for glioblastoma tumour growth

Brisudova P,Stojanovic D,Novak J,Nahacka Z,Lopes Oliveira G,Vanatko O,Dvorakova S, Endaya B,Truksa J,Kubiskova M,Foltynova A, Jirak D, Jirat-Ziolkowsk...

Trimetallic BSA-Au-Ag-Fe nanoclusters as a bimodal probe for fluorescence and magnetic resonance imaging

Běčák, P., Seidlerová, J., Půlpánová, D., Jirát-Ziółkowska, N., Ciprian, D., Kratošová, G., Bajtošová, L.

Water-soluble fluorinated copolymers as highly sensitive 19F MRI tracers: From structure optimization to multimodal tumor imaging.

3. Tunca Arın, T.A, Havlíček, D, Dorado Daza, D.F, Jirát-Ziółkowska, N, Pop-Georgievski, O, Jirák, D, Sedláček, O.

Plectin-mediated cytoskeletal crosstalk as a target for inhibition of hepatocellular carcinoma growth and metastasis

Outla Z, Oyman-Eyrilmez G, Korelova K, Prechova M, Frick L, Sarnova L, Bisht P, Novotna P, Kosla J, Bortel P, Borutzki Y, Bileck A, Gerner C, Rahbari ...

Our Team

Our equipment

Bruker Biospec 7T
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Bruker Biospec 7T

The experimental 7T MR spectrometer Bruker Biospec 70/30 (Bruker, Ettlingen, Germany) was officially put into service in December 2023. It is used for research projects of the experimental MR group, which is mainly focused on anatomical and molecular imaging, e.g. visualization of labeled transplanted cells. It replaced the original 4.7T MR spectrometer.


 

Courses

MR KURZ IKEM

PZM IKEM in cooperation with SRLA ČR organizes Certified Course - Magnetic Resonance Imaging

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